Publications

Microbiology and molecular biology reviews : MMBR. 2004-03-01; 68.1: 1-108.
Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism
Borkovich KA, Alex LA, Yarden O, Freitag M, Turner GE, Read ND, Seiler S, Bell-Pedersen D, Paietta J, Plesofsky N, Plamann M, Goodrich-Tanrikulu M, Schulte U, Mannhaupt G, Nargang FE, Radford A, Selitrennikoff C, Galagan JE, Dunlap JC, Loros JJ, Catcheside D, Inoue H, Aramayo R, Polymenis M, Selker EU, Sachs MS, Marzluf GA, Paulsen I, Davis R, Ebbole DJ, Zelter A, Kalkman ER, O'Rourke R, Bowring F, Yeadon J, Ishii C, Suzuki K, Sakai W, Pratt R
PMID: 15007097
Molecular biology and evolution. 2004-03-01; 21.3: 520-8.
The ingi and RIME non-LTR retrotransposons are not randomly distributed in the genome of Trypanosoma brucei
Bringaud F, Biteau N, Zuiderwijk E, Berriman M, El-Sayed NM, Ghedin E, Melville SE, Hall N, Baltz T
PMID: 14694076
PLoS biology. 2004-03-01; 2.3: E69.
Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements
Wu M, Sun LV, Vamathevan J, Riegler M, Deboy R, Brownlie JC, McGraw EA, Martin W, Esser C, Ahmadinejad N, Wiegand C, Madupu R, Beanan MJ, Brinkac LM, Daugherty SC, Durkin AS, Kolonay JF, Nelson WC, Mohamoud Y, Lee P, Berry K, Young MB, Utterback T, Weidman J, Nierman WC, Paulsen IT, Nelson KE, Tettelin H, O'Neill SL, Eisen JA
PMID: 15024419
Infection and immunity. 2004-03-01; 72.3: 1733-45.
Attenuation of late-stage disease in mice infected by the Mycobacterium tuberculosis mutant lacking the SigF alternate sigma factor and identification of SigF-dependent genes by microarray analysis
Geiman DE, Kaushal D, Ko C, Tyagi S, Manabe YC, Schroeder BG, Fleischmann RD, Morrison NE, Converse PJ, Chen P, Bishai WR
PMID: 14977982
Proceedings of the National Academy of Sciences of the United States of America. 2004-02-17; 101.7: 1916-21.
Whole-genome shotgun assembly and comparison of human genome assemblies
Istrail S, Sutton GG, Florea L, Halpern AL, Mobarry CM, Lippert R, Walenz B, Shatkay H, Dew I, Miller JR, Flanigan MJ, Edwards NJ, Bolanos R, Fasulo D, Halldorsson BV, Hannenhalli S, Turner R, Yooseph S, Lu F, Nusskern DR, Shue BC, Zheng XH, Zhong F, Delcher AL, Huson DH, Kravitz SA, Mouchard L, Reinert K, Remington KA, Clark AG, Waterman MS, Eichler EE, Adams MD, Hunkapiller MW, Myers EW, Venter JC
PMID: 14769938
Science (New York, N.Y.). 2004-02-06; 303.5659: 807.
A SNP map of the rat genome generated from cDNA sequences
Zimdahl H, Nyakatura G, Brandt P, Schulz H, Hummel O, Fartmann B, Brett D, Droege M, Monti J, Lee YA, Sun Y, Zhao S, Winter EE, Ponting CP, Chen Y, Kasprzyk A, Birney E, Ganten D, Hubner N
PMID: 14764869
Nature genetics. 2004-02-01; 36.2: 138-45.
Sequencing of a rice centromere uncovers active genes
Nagaki K, Cheng Z, Ouyang S, Talbert PB, Kim M, Jones KM, Henikoff S, Buell CR, Jiang J
PMID: 14716315
Trends in microbiology. 2004-02-01; 12.2: 62-3.
The power in comparison
Nierman WC, Fraser CM
PMID: 15040325
Medical mycology. 2004-02-01; 42.1: 59-71.
Profiling gene expression in Coccidioides posadasii
Delgado N, Hung CY, Tarcha E, Gardner MJ, Cole GT
PMID: 14982115
Molecular microbiology. 2004-02-01; 51.4: 1051-70.
Identification of competence pheromone responsive genes in Streptococcus pneumoniae by use of DNA microarrays
Peterson SN, Sung CK, Cline R, Desai BV, Snesrud EC, Luo P, Walling J, Li H, Mintz M, Tsegaye G, Burr PC, Do Y, Ahn S, Gilbert J, Fleischmann RD, Morrison DA
PMID: 14763980

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