Publications

Genome research. 2005-04-01; 15.4: 487-95.
Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis
Ayele M, Haas BJ, Kumar N, Wu H, Xiao Y, Van Aken S, Utterback TR, Wortman JR, White OR, Town CD
PMID: 15805490
PLoS biology. 2005-04-01; 3.4: e121.
The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode
Foster J, Ganatra M, Kamal I, Ware J, Makarova K, Ivanova N, Bhattacharyya A, Kapatral V, Kumar S, Posfai J, Vincze T, Ingram J, Moran L, Lapidus A, Omelchenko M, Kyrpides N, Ghedin E, Wang S, Goltsman E, Joukov V, Ostrovskaya O, Tsukerman K, Mazur M, Comb D, Koonin E, Slatko B
PMID: 15780005
PLoS biology. 2005-04-01; 3.4: e110.
Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans
Yohn CT, Jiang Z, McGrath SD, Hayden KE, Khaitovich P, Johnson ME, Eichler MY, McPherson JD, Zhao S, Pääbo S, Eichler EE
PMID: 15737067
Molecular biology and evolution. 2005-04-01; 22.4: 845-55.
Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice
Nagaki K, Neumann P, Zhang D, Ouyang S, Buell CR, Cheng Z, Jiang J
PMID: 15616142
Plant physiology. 2005-04-01; 137.4: 1174-81.
Sequencing the genespaces of Medicago truncatula and Lotus japonicus
Young ND, Cannon SB, Sato S, Kim D, Cook DR, Town CD, Roe BA, Tabata S
PMID: 15824279
Pharmacogenomics. 2005-04-01; 6.3: 245-58.
Genomic approaches for reconstructing gene networks
Lee NH
PMID: 16013956
Journal of bacteriology. 2005-04-01; 187.7: 2426-38.
Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain
Gill SR, Fouts DE, Archer GL, Mongodin EF, Deboy RT, Ravel J, Paulsen IT, Kolonay JF, Brinkac L, Beanan M, Dodson RJ, Daugherty SC, Madupu R, Angiuoli SV, Durkin AS, Haft DH, Vamathevan J, Khouri H, Utterback T, Lee C, Dimitrov G, Jiang L, Qin H, Weidman J, Tran K, Kang K, Hance IR, Nelson KE, Fraser CM
PMID: 15774886
Proceedings of the National Academy of Sciences of the United States of America. 2005-03-22; 102.12: 4430-5.
Spliceosomal introns in the deep-branching eukaryote Trichomonas vaginalis
Vanácová S, Yan W, Carlton JM, Johnson PJ
PMID: 15764705
BMC biology. 2005-03-22; 3.7.
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release
Haas BJ, Wortman JR, Ronning CM, Hannick LI, Smith RK, Maiti R, Chan AP, Yu C, Farzad M, Wu D, White O, Town CD
PMID: 15784138
Trends in microbiology. 2005-03-01; 13.3: 95-7.
Genomics at the genus scale
Ravel J, Fraser CM
PMID: 15737726

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